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Module:BiologicalAgeBiomarkers: Difference between revisions

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Module:BiologicalAgeBiomarkers (view source)

Revision as of 02:11, 19 February 2024

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local biomarkers = {
local biomarkers = {
   -- Cardiovascular System
   -- Cardiovascular System
    SBP = {name = "Systolic Blood Pressure (SBP)", system = "Cardiovascular System"},
{key = "SBP", name = "Systolic Blood Pressure (SBP)", system = "Cardiovascular System"},
    DBP = {name = "Diastolic Blood Pressure (DBP)", system = "Cardiovascular System"},
{key = "DBP", name = "Diastolic Blood Pressure (DBP)", system = "Cardiovascular System"},
    PP = {name = "Pulse Pressure", system = "Cardiovascular System"},
{key = "PP", name = "Pulse Pressure", system = "Cardiovascular System"},
    MAP = {name = "Mean Arterial Pressure", system = "Cardiovascular System"},
{key = "MAP", name = "Mean Arterial Pressure", system = "Cardiovascular System"},
    Pulse = {name = "Pulse", system = "Cardiovascular System"},
{key = "Pulse", name = "Pulse", system = "Cardiovascular System"},
    PWV = {name = "Pulse Wave Velocity", system = "Cardiovascular System"},
{key = "PWV", name = "Pulse Wave Velocity", system = "Cardiovascular System"},
    HR = {name = "Heart Rate", system = "Cardiovascular System"},
{key = "HR", name = "Heart Rate", system = "Cardiovascular System"},
    IMT = {name = "Intima-Media Thickness", system = "Cardiovascular System"},
{key = "IMT", name = "Intima-Media Thickness", system = "Cardiovascular System"},
    MinIMT = {name = "Minimum Intima-Media Thickness", system = "Cardiovascular System"},
{key = "MinIMT", name = "Minimum Intima-Media Thickness", system = "Cardiovascular System"},
    EDV = {name = "End Diastolic Velocity", system = "Cardiovascular System"},
{key = "EDV", name = "End Diastolic Velocity", system = "Cardiovascular System"},
    MVEAP = {name = "Mitral Valve E/A Peak", system = "Cardiovascular System"},
{key = "MVEAP", name = "Mitral Valve E/A Peak", system = "Cardiovascular System"},
    MVEL_MVES_MVEA = {name = "MVEL, MVES, MVEA", system = "Cardiovascular System"},
{key = "MVEL_MVES_MVEA", name = "MVEL, MVES, MVEA", system = "Cardiovascular System"},
    AI = {name = "Atherosclerosis Index", system = "Cardiovascular System"},
{key = "AI", name = "Atherosclerosis Index", system = "Cardiovascular System"},
    NTproBNP = {name = "NT-proBNP", system = "Cardiovascular System"},
{key = "NTproBNP", name = "NT-proBNP", system = "Cardiovascular System"},
    CTnI = {name = "Cardiac Troponin I", system = "Cardiovascular System"},
{key = "CTnI", name = "Cardiac Troponin I", system = "Cardiovascular System"},
    CPK = {name = "Creatine Phosphokinase", system = "Cardiovascular System"},
{key = "CPK", name = "Creatine Phosphokinase", system = "Cardiovascular System"},
    Homocysteine = {name = "Homocysteine", system = "Cardiovascular System"},
{key = "Homocysteine", name = "Homocysteine", system = "Cardiovascular System"},


    -- Respiratory System
-- Respiratory System
    FVC = {name = "Forced Vital Capacity (FVC)", system = "Respiratory System"},
{key = "FVC", name = "Forced Vital Capacity (FVC)", system = "Respiratory System"},
    FEV1 = {name = "Forced Expiratory Volume in 1 Second (FEV1)", system = "Respiratory System"},
{key = "FEV1", name = "Forced Expiratory Volume in 1 Second (FEV1)", system = "Respiratory System"},
    VC = {name = "Vital Capacity", system = "Respiratory System"},
{key = "VC", name = "Vital Capacity", system = "Respiratory System"},
    MMFR = {name = "Maximal Midexpiratory Flow Rate 75/25", system = "Respiratory System"},
{key = "MMFR", name = "Maximal Midexpiratory Flow Rate 75/25", system = "Respiratory System"},
    VO2Max = {name = "VO2 Max", system = "Respiratory System"},
{key = "VO2Max", name = "VO2 Max", system = "Respiratory System"},
    CR = {name = "Chest Radiography", system = "Respiratory System"},
{key = "CR", name = "Chest Radiography", system = "Respiratory System"},


    -- Nervous System
-- Nervous System
    MMSE = {name = "Mini-Mental State Examination (MMSE)", system = "Nervous System"},
{key = "MMSE", name = "Mini-Mental State Examination (MMSE)", system = "Nervous System"},
    DST = {name = "Digital Symbol Test", system = "Nervous System"},
{key = "DST", name = "Digital Symbol Test", system = "Nervous System"},
    NM = {name = "Numeric Memory", system = "Nervous System"},
{key = "NM", name = "Numeric Memory", system = "Nervous System"},
    AM = {name = "Associated Memory", system = "Nervous System"},
{key = "AM", name = "Associated Memory", system = "Nervous System"},
    TM = {name = "Topological Memory", system = "Nervous System"},
{key = "TM", name = "Topological Memory", system = "Nervous System"},
    STM = {name = "Short-Time Memory", system = "Nervous System"},
{key = "STM", name = "Short-Time Memory", system = "Nervous System"},
    Concentration = {name = "Concentration", system = "Nervous System"},
{key = "Concentration", name = "Concentration", system = "Nervous System"},
    IMD = {name = "Intellectuality - Mental Defect", system = "Nervous System"},
{key = "IMD", name = "Intellectuality - Mental Defect", system = "Nervous System"},
    TMT = {name = "Trail Making Test", system = "Nervous System"},
{key = "TMT", name = "Trail Making Test", system = "Nervous System"},
 
    -- Endocrine Metabolic System
-- Endocrine Metabolic System
    Glucose = {name = "Glucose", system = "Endocrine Metabolic System"},
{key = "Glucose", name = "Glucose", system = "Endocrine Metabolic System"},
    HBA1C = {name = "HBA1C", system = "Endocrine Metabolic System"},
{key = "HBA1C", name = "HBA1C", system = "Endocrine Metabolic System"},
    CPeptide = {name = "C-peptide", system = "Endocrine Metabolic System"},
{key = "CPeptide", name = "C-peptide", system = "Endocrine Metabolic System"},
    Insulin = {name = "Insulin", system = "Endocrine Metabolic System"},
{key = "Insulin", name = "Insulin", system = "Endocrine Metabolic System"},
    TG = {name = "Triglyceride", system = "Endocrine Metabolic System"},
{key = "TG", name = "Triglyceride", system = "Endocrine Metabolic System"},
    TC = {name = "Total Cholesterol (TC)", system = "Endocrine Metabolic System"},
{key = "TC", name = "Total Cholesterol (TC)", system = "Endocrine Metabolic System"},
    HDL = {name = "High-Density Lipoprotein (HDL)", system = "Endocrine Metabolic System"},
{key = "HDL", name = "High-Density Lipoprotein (HDL)", system = "Endocrine Metabolic System"},
    LDL = {name = "Low-Density Lipoprotein (LDL)", system = "Endocrine Metabolic System"},
{key = "LDL", name = "Low-Density Lipoprotein (LDL)", system = "Endocrine Metabolic System"},
    ApoA1B = {name = "Apolipoprotein A1 and B", system = "Endocrine Metabolic System"},
{key = "ApoA1B", name = "Apolipoprotein A1 and B", system = "Endocrine Metabolic System"},
    TSH = {name = "Thyroid-Stimulating Hormone (TSH)", system = "Endocrine Metabolic System"},
{key = "TSH", name = "Thyroid-Stimulating Hormone (TSH)", system = "Endocrine Metabolic System"},
    Testosterone = {name = "Testosterone", system = "Endocrine Metabolic System"},
{key = "Testosterone", name = "Testosterone", system = "Endocrine Metabolic System"},
    VitaminD = {name = "Vitamin D", system = "Endocrine Metabolic System"},
{key = "VitaminD", name = "Vitamin D", system = "Endocrine Metabolic System"},
    Calcium = {name = "Calcium", system = "Endocrine Metabolic System"},
{key = "Calcium", name = "Calcium", system = "Endocrine Metabolic System"},
    Potassium = {name = "Potassium", system = "Endocrine Metabolic System"},
{key = "Potassium", name = "Potassium", system = "Endocrine Metabolic System"},
    Sodium = {name = "Sodium", system = "Endocrine Metabolic System"},
{key = "Sodium", name = "Sodium", system = "Endocrine Metabolic System"},
    InorganicPhosphorus = {name = "Inorganic Phosphorus", system = "Endocrine Metabolic System"},
{key = "InorganicPhosphorus", name = "Inorganic Phosphorus", system = "Endocrine Metabolic System"},
    Urea = {name = "Urea", system = "Endocrine Metabolic System"},
{key = "Urea", name = "Urea", system = "Endocrine Metabolic System"},
    Creatinine = {name = "Creatinine", system = "Endocrine Metabolic System"},
{key = "Creatinine", name = "Creatinine", system = "Endocrine Metabolic System"},
    eGFR = {name = "Estimated Glomerular Filtration Rate (eGFR)", system = "Endocrine Metabolic System"},
{key = "eGFR", name = "Estimated Glomerular Filtration Rate (eGFR)", system = "Endocrine Metabolic System"},
    UricAcid = {name = "Uric Acid", system = "Endocrine Metabolic System"},
{key = "UricAcid", name = "Uric Acid", system = "Endocrine Metabolic System"},
    CystatinC = {name = "Cystatin C", system = "Endocrine Metabolic System"},
{key = "CystatinC", name = "Cystatin C", system = "Endocrine Metabolic System"},
    CreatinineClearance = {name = "Creatinine Clearance", system = "Endocrine Metabolic System"},
{key = "CreatinineClearance", name = "Creatinine Clearance", system = "Endocrine Metabolic System"},
    UrineSG = {name = "Urine Specific Gravity", system = "Endocrine Metabolic System"},
{key = "UrineSG", name = "Urine Specific Gravity", system = "Endocrine Metabolic System"},
    UrinepH = {name = "Urine pH", system = "Endocrine Metabolic System"},
{key = "UrinepH", name = "Urine pH", system = "Endocrine Metabolic System"},
 
    -- Digestive System
-- Digestive System
    ALT = {name = "Alanine Aminotransferase (ALT)", system = "Digestive System"},
{key = "ALT", name = "Alanine Aminotransferase (ALT)", system = "Digestive System"},
    AST = {name = "Aspartate Aminotransferase (AST)", system = "Digestive System"},
{key = "AST", name = "Aspartate Aminotransferase (AST)", system = "Digestive System"},
    ALP = {name = "Alkaline Phosphatase (ALP)", system = "Digestive System"},
{key = "ALP", name = "Alkaline Phosphatase (ALP)", system = "Digestive System"},
    TotalProtein = {name = "Total Protein", system = "Digestive System"},
{key = "TotalProtein", name = "Total Protein", system = "Digestive System"},
    Albumin = {name = "Albumin", system = "Digestive System"},
{key = "Albumin", name = "Albumin", system = "Digestive System"},
    AGRatio = {name = "Albumin/Globulin Ratio (A/G)", system = "Digestive System"},
{key = "AGRatio", name = "Albumin/Globulin Ratio (A/G)", system = "Digestive System"},
    TotalBilirubin = {name = "Total Bilirubin", system = "Digestive System"},
{key = "TotalBilirubin", name = "Total Bilirubin", system = "Digestive System"},
    DirectBilirubin = {name = "Direct Bilirubin", system = "Digestive System"},
{key = "DirectBilirubin", name = "Direct Bilirubin", system = "Digestive System"},
    Amylase = {name = "Amylase", system = "Digestive System"},
{key = "Amylase", name = "Amylase", system = "Digestive System"},
    LDH = {name = "Lactate Dehydrogenase", system = "Digestive System"},
{key = "LDH", name = "Lactate Dehydrogenase", system = "Digestive System"},
    Alpha2Globulin = {name = "Alpha 2 Globulin", system = "Digestive System"},
{key = "Alpha2Globulin", name = "Alpha 2 Globulin", system = "Digestive System"},
    GGT = {name = "Gamma Glutamyl Transpeptidase", system = "Digestive System"},
{key = "GGT", name = "Gamma Glutamyl Transpeptidase", system = "Digestive System"},
 
    -- Hematologic System
-- Hematologic System
    RBC = {name = "Red Blood Cell", system = "Hematologic System"},
{key = "RBC", name = "Red Blood Cell", system = "Hematologic System"},
    RDW = {name = "Red Blood Cell Volume Distribution Width", system = "Hematologic System"},
{key = "RDW", name = "Red Blood Cell Volume Distribution Width", system = "Hematologic System"},
    Hematocrit = {name = "Hematocrit", system = "Hematologic System"},
{key = "Hematocrit", name = "Hematocrit", system = "Hematologic System"},
    MCV = {name = "Mean Corpuscular Volume", system = "Hematologic System"},
{key = "MCV", name = "Mean Corpuscular Volume", system = "Hematologic System"},
    MCH = {name = "Mean Corpuscular Hemoglobin", system = "Hematologic System"},
{key = "MCH", name = "Mean Corpuscular Hemoglobin", system = "Hematologic System"},
    MCHC = {name = "Mean Corpuscular Hemoglobin Concentration", system = "Hematologic System"},
{key = "MCHC", name = "Mean Corpuscular Hemoglobin Concentration", system = "Hematologic System"},
    Hemoglobin = {name = "Hemoglobin", system = "Hematologic System"},
{key = "Hemoglobin", name = "Hemoglobin", system = "Hematologic System"},
    WBC = {name = "White Blood Cell", system = "Hematologic System"},
{key = "WBC", name = "White Blood Cell", system = "Hematologic System"},
    Granulocytes = {name = "Granulocytes", system = "Hematologic System"},
{key = "Granulocytes", name = "Granulocytes", system = "Hematologic System"},
    Neutrophils = {name = "Neutrophils", system = "Hematologic System"},
{key = "Neutrophils", name = "Neutrophils", system = "Hematologic System"},
    BasophilsEosinophils = {name = "Basophils, Eosinophils", system = "Hematologic System"},
{key = "BasophilsEosinophils", name = "Basophils, Eosinophils", system = "Hematologic System"},
    Lymphocytes = {name = "Lymphocytes", system = "Hematologic System"},
{key = "Lymphocytes", name = "Lymphocytes", system = "Hematologic System"},
    Monocytes = {name = "Monocytes", system = "Hematologic System"},
{key = "Monocytes", name = "Monocytes", system = "Hematologic System"},
    Platelet = {name = "Platelet", system = "Hematologic System"},
{key = "Platelet", name = "Platelet", system = "Hematologic System"},
    MPV = {name = "Mean Platelet Volume", system = "Hematologic System"},
{key = "MPV", name = "Mean Platelet Volume", system = "Hematologic System"},
    PDW = {name = "Platelet Distribution Width", system = "Hematologic System"},
{key = "PDW", name = "Platelet Distribution Width", system = "Hematologic System"},
    ESR = {name = "Erythrocyte Sedimentation Rate", system = "Hematologic System"},
{key = "ESR", name = "Erythrocyte Sedimentation Rate", system = "Hematologic System"},
    DdimerFibrinogen = {name = "D-dimer, Fibrinogen", system = "Hematologic System"},
{key = "DdimerFibrinogen", name = "D-dimer, Fibrinogen", system = "Hematologic System"},
    Ferritin = {name = "Ferritin", system = "Hematologic System"},
{key = "Ferritin", name = "Ferritin", system = "Hematologic System"},
    Transferrin = {name = "Transferrin", system = "Hematologic System"},
{key = "Transferrin", name = "Transferrin", system = "Hematologic System"},
 
    -- Sensory System
-- Sensory System
    VisualAcc = {name = "Visual Accommodation", system = "Sensory System"},
{key = "VisualAcc", name = "Visual Accommodation", system = "Sensory System"},
    VisualReactTime = {name = "Visual Reaction Time", system = "Sensory System"},
{key = "VisualReactTime", name = "Visual Reaction Time", system = "Sensory System"},
    VisualAcuity = {name = "Visual Acuity", system = "Sensory System"},
{key = "VisualAcuity", name = "Visual Acuity", system = "Sensory System"},
    Hearing = {name = "Hearing", system = "Sensory System"},
{key = "Hearing", name = "Hearing", system = "Sensory System"},
    Vibrotactile = {name = "Vibrotactile", system = "Sensory System"},
{key = "Vibrotactile", name = "Vibrotactile", system = "Sensory System"},
    RetinalPhotos = {name = "Retinal Photos", system = "Sensory System"},
{key = "RetinalPhotos", name = "Retinal Photos", system = "Sensory System"},
 
    -- Inflammatory Index
-- Inflammatory Index
    CRP = {name = "C-Reactive Protein (CRP)", system = "Inflammatory Index"},
{key = "CRP", name = "C-Reactive Protein (CRP)", system = "Inflammatory Index"},
    CMVOptDensity = {name = "Cytomegalovirus Optical Density", system = "Inflammatory Index"},
{key = "CMVOptDensity", name = "Cytomegalovirus Optical Density", system = "Inflammatory Index"},
    IL6 = {name = "Interleukin-6", system = "Inflammatory Index"},
{key = "IL6", name = "Interleukin-6", system = "Inflammatory Index"},
    Pselectin = {name = "P-selectin", system = "Inflammatory Index"},
{key = "Pselectin", name = "P-selectin", system = "Inflammatory Index"},
 
    -- Motion Index
-- Motion Index
    GripStrength = {name = "Grip Strength", system = "Motion Index"},
{key = "GripStrength", name = "Grip Strength", system = "Motion Index"},
    VerticalJump = {name = "Vertical Jump", system = "Motion Index"},
{key = "VerticalJump", name = "Vertical Jump", system = "Motion Index"},
    TUGTest = {name = "Timed Up and Go Test", system = "Motion Index"},
{key = "TUGTest", name = "Timed Up and Go Test", system = "Motion Index"},
    ChairRiseTime = {name = "Chair Rise Time", system = "Motion Index"},
{key = "ChairRiseTime", name = "Chair Rise Time", system = "Motion Index"},
    PhysicalActivityWeek = {name = "1-Week Physical Activity", system = "Motion Index"},
{key = "PhysicalActivityWeek", name = "1-Week Physical Activity", system = "Motion Index"},
 
    -- Body Morphology Index
-- Body Morphology Index
    WaistCirc = {name = "Waist Circumference (WC)", system = "Body Morphology Index"},
{key = "WaistCirc", name = "Waist Circumference (WC)", system = "Body Morphology Index"},
    WaistHipRatio = {name = "Waist-to-Hip Ratio", system = "Body Morphology Index"},
{key = "WaistHipRatio", name = "Waist-to-Hip Ratio", system = "Body Morphology Index"},
    WaistHeightRatio = {name = "Waist-to-Height Ratio", system = "Body Morphology Index"},
{key = "WaistHeightRatio", name = "Waist-to-Height Ratio", system = "Body Morphology Index"},
    BMI = {name = "Body Mass Index (BMI)", system = "Body Morphology Index"},
{key = "BMI", name = "Body Mass Index (BMI)", system = "Body Morphology Index"},
    Weight = {name = "Weight", system = "Body Morphology Index"},
{key = "Weight", name = "Weight", system = "Body Morphology Index"},
    Height = {name = "Height", system = "Body Morphology Index"},
{key = "Height", name = "Height", system = "Body Morphology Index"},
    BodyFat = {name = "Body Fat", system = "Body Morphology Index"},
{key = "BodyFat", name = "Body Fat", system = "Body Morphology Index"},
    LeanBodyMass = {name = "Lean Body Mass", system = "Body Morphology Index"},
{key = "LeanBodyMass", name = "Lean Body Mass", system = "Body Morphology Index"},
    SoftLeanMass = {name = "Soft Lean Mass", system = "Body Morphology Index"},
{key = "SoftLeanMass", name = "Soft Lean Mass", system = "Body Morphology Index"},
 
    -- Genetic Index
-- Genetic Index
    TelomereLength = {name = "Terminal Telomere Restriction Fragment", system = "Genetic Index"}
{key = "TelomereLength", name = "Terminal Telomere Restriction Fragment", system = "Genetic Index"}
}
}


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     -- Generate rows for each biomarker
     -- Generate rows for each biomarker
     for abbr, details in pairs(biomarkers) do
     for i, details in ipairs(biomarkers) do
         wikitable = wikitable .. '|-\n'
         wikitable = wikitable .. '|-\n'
         wikitable = wikitable .. '| '  .. details.system .. ' || ' .. details.name
         wikitable = wikitable .. '| '  .. details.system .. ' || ' .. details.name
         for _, study in pairs(studies) do
         for _, study in pairs(studies) do
             -- Retrieve data value for the current cell, using the nested structure
             -- Retrieve data value for the current cell, using the nested structure
             local cellValue = study.data[abbr] or ""
             local cellValue = study.data[details.key] or ""
             wikitable = wikitable .. ' || ' .. cellValue
             wikitable = wikitable .. ' || ' .. cellValue
         end
         end
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